
Many inheritable changes in gene function are not explained by changes in the DNA sequence. Such epigenetic mechanisms are known to influence gene function in most complex organisms and include effects such as transposon function, chromosome imprinting, yeast mating type switching, and telomeric silencing. In recent years, epigenetic effects have become a major focus of research activity. This monograph, edited by three well-known biologists from different specialties, is the first to review and synthesize what is known about these effects across all species, particularly from a molecular perspective, and will be of interest to everyone in the fields of molecular biology and genetics.
Table of Contents
| Preface/Front Matter |
| V.E.A. Russo, R.A. Martienssen, A.D. Riggs |
| Excerpt PDF (i-xii) |
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| Introduction |
| Arthur D. Riggs, Robert A. Martienssen, Vincenzo E.A. Russo |
| Excerpt PDF (1-4) |
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| DNA Methylation in Eukaryotes: 20 Years On |
| Robin Holliday |
| Excerpt PDF (5-27) |
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| Overview of Epigenetic Mechanisms |
| Arthur D. Riggs, Thomas N. Porter |
| Excerpt PDF (29-45) |
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| Gene Silencing in Mammalian Cells |
| Robin Holliday, Thu Ho, Richard Paulin |
| Excerpt PDF (47-59) |
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| DNA Methyltransferases in Mammalian Development and Genome Defense |
| Timothy H. Bestor |
| Excerpt PDF (61-76) |
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| The Mutational Burden of 5-Methylcytosine |
| Allen S. Yang, Peter A. Jones, Atsuko Shibata |
| Excerpt PDF (77-94) |
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| Plant Methyltransferases and Their Targets in the Plant Genome |
| Roger L.P. Adams, Sriharsa Pradhan, Colin A. Johnson, Heather Lindsay, Evonne W.L. Shek, Gareth I. Jenkins, Nigel A.R. Urwin |
| Excerpt PDF (95-108) |
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| Mechanism of DNA Demethylation in Vertebrates and Its Biological Significance |
| Jean-Pierre Jost |
| Excerpt PDF (109-125) |
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| The Role of DNA Methylation in Plant Development |
| E. Jean Finnegan |
| Excerpt PDF (127-140) |
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| Methylation-related Epigenetic Signals in Bacterial DNA |
| Josep Casadesús, Joaquín Torreblanca |
| Excerpt PDF (141-153) |
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| DNA Modification and Restriction: Selfish Behavior of an Epigenetic System |
| Ichizo Kobayashi |
| Excerpt PDF (155-172) |
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| Organization and Control of Imprinted Genes: The Common Features |
| Justin F-x. Ainscough, M. Azim Surani |
| Excerpt PDF (173-194) |
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| Genomic Imprinting and Modifier Genes in the Mouse |
| Jörn Walter, Torsten Krüger, Sabine Engemann, Nicholas D. Allen, Gavin Kelsey, Robert Feil, Thierry Forné, Wolf Reik |
| Excerpt PDF (195-213) |
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| Establishment of Imprinted Methylation Patterns during Development |
| Ruth Shemer, Aharon Razin |
| Excerpt PDF (215-229) |
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| X-Chromosome Inactivation and Epigenetic Mechanisms |
| Arthur D. Riggs, Thomas N. Porter |
| Excerpt PDF (231-248) |
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| X-Chromosome Inactivation: XCE and the Candidate Region for the X-Inactivation Center |
| Philip Avner |
| Excerpt PDF (249-265) |
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| Epigenetic Silencing and Activation of a Maize r Gene |
| Jerry L. Kermicle |
| Excerpt PDF (267-287) |
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| b and pl Paramutation in Maize: Heritable Transcription States Programmed during Development |
| Vicki L. Chandler, Kenneth M. Kubo, Jay B. Hollick |
| Excerpt PDF (289-304) |
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| DNA Methylation of Flower Color Transgenes in Petunia hybrida |
| Peter Meyer |
| Excerpt PDF (305-317) |
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| Position-effect Variegation in Drosophila: Recent Progress |
| Steven Henikoff |
| Excerpt PDF (319-334) |
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| Control and Function of DNA Methylation in Neurospora crassa |
| Ann T. Hagemann, Eric U. Selker |
| Excerpt PDF (335-394) |
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| Silencing of the Gene hph in Neurospora crassa |
| Vincenzo E.A. Russo, Yeon-Su Lee, Antonio C. Codón |
| Excerpt PDF (345-359) |
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| Prokaryotic Model of Epigenetic Inactivation: Chromosomal Silencing in Bacillus subtilis Fusion Products |
| Valérie Grandjean, Françoise Le Hégarat, Luisa Hirschbein |
| Excerpt PDF (361-376) |
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| Stable Epigenetic States in Differentiated Plant Cells: Implications for Somaclonal Variation and Gene Silencing in Transgenic Plants |
| Marjori A. Matzke, Antonius J.M. Matzke |
| Excerpt PDF (377-392) |
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| Sense Cosuppression of Flower Color Genes: Metastable Morphology-based Phenotypes and the Prepattern-threshold Hypothesis |
| Richard A. Jorgensen, Qiudeng Que, James J. English, Huai-Yu Wang |
| Excerpt PDF (393-402) |
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| Analysis of a Tobacco Transgene Locus That Triggers Both Transcriptional and Posttranscriptional Silencing |
| Hervé Vaucheret, Taline Elmayan, Philippe Mourrain, Jean-Christophe Palauqui |
| Excerpt PDF (403-414) |
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| Epigenetic Modifications and Gene Silencing in Plants |
| Frederick Meins, Jr. |
| Excerpt PDF (415-442) |
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| Transcriptional Silencing in the Fission Yeast: A Manifestation of Higher Order Chromosome Structure and Functions |
| Robin C. Allshire |
| Excerpt PDF (443-466) |
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| Transcriptional Silencing of the Yeast Mating-type Genes |
| Scott G. Holmes, Miriam Braunstein, James R. Broach |
| Excerpt PDF (467-487) |
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| Stable Chromatin States Regulating Homeotic Genes In Drosophila |
| Vincenzo Pirrotta |
| Excerpt PDF (489-505) |
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| The Role of Polycomb Group and Trithorax Group Chromatin Complexes in the Maintenance of Determined Cell States |
| Renato Paro, Peter J. Harte |
| Excerpt PDF (507-528) |
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| Histones, Histone Modifications, and the Inheritance of Chromatin Structure |
| Stefan U. Kass, Alan P. Wolffe |
| Excerpt PDF (529-546) |
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| The Silencing of Human Immunodeficiency Virus |
| Daniel P. Bednarik |
| Excerpt PDF (547-559) |
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| CpG Suppression in HIV-1 Versus HIV-2: Correlation with Pathogenicity and Possible Implications for the Design of Antiretroviral Vaccines |
| Jonathan W. Nyce |
| Excerpt PDF (561-573) |
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| Epigenetic Regulation of the Maize Spm Transposable Element |
| Nina Fedoroff |
| Excerpt PDF (575-592) |
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| Epigenetic Silencing of Mu Transposable Elements in Maize |
| Robert A. Martienssen |
| Excerpt PDF (593-608) |
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| Essentials of Plant Development |
| Robert A. Martienssen |
| Excerpt PDF (611-617) |
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| Essentials of Mouse Development |
| Arthur D. Riggs |
| Excerpt PDF (619-625) |
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| Paramutation: Directed Genetic Change |
| R. Alexander Brink, E. Derek Styles, John D. Axtell |
| Excerpt PDF (629-638) |
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| DNA Modification Mechanisms and Gene Activity during Development |
| R. Holliday, J. E. Pugh |
| Excerpt PDF (639-645) |
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| X inactivation, differentiation, and DNA methylation |
| A.D. Riggs |
| Excerpt PDF (646-662) |
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| Glossary |
| Excerpt PDF (663-679) |
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| Index |
| Excerpt PDF (681-692) |
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